Chromosome I
TE
Positions
Strand
Identity (%)
12009609-12009736
ATMUNX1 247-377
c
0.75
12009824-12009896
ATMUNX1 228-292
d
0.76
12012623-12013122
ATTIR16T3A 3-501
c
0.91
12016157-12017069
ATENSPM1A 3330-4279
c
0.97
12017083-12017150
ATENSPM1A 3155-3222
c
1.00
12017156-12017350
ATENSPM1A 3156-3343
c
0.95
12017351-12020302
ATENSPM1A 1-3005
c
0.97
12019531-12019572
ATENSPM1A 810-851
c
0.95
12031738-12032017
ATHILA5_LTR 1-279
d
0.74
12032092-12032227
ATHILA5_LTR 415-550
d
0.72
12032228-12032332
ATHILA5_LTR 551-656
d
0.74
12032351-12032918
ATHILA5_LTR 667-1230
d
0.83
12033090-12033273
ATHILA5_LTR 1311-1512
d
0.78
12033278-12033359
ATHILA5_LTR 1531-1613
d
0.76
12042209-12042527
ATLINE1_3A 13-330
d
0.67
12084325-12084771
ATREP8 1-449
d
0.91
12097573-12098132
ATREP2 1-564
d
0.95
12136751-12137399
ATREP14 88-735
c
0.95
12137400-12137798
ATREP14 1-398
c
0.95
12155911-12155943
ATSINE3 139-171
c
0.88
12172633-12174927
ATENSPM10 5943-8272
c
0.96
12174928-12177335
ATENSPM10 2-2418
c
0.98
12183522-12183691
ATREP2 395-564
c
0.88
12183721-12183799
ATREP14 269-346
c
0.77
12183851-12184106
ATREP14 1-351
c
0.84
12228859-12229071
HELITRONY1C 2519-2731
c
0.81
12231048-12231446
HELITRON1 1-400
c
0.83
12240622-12241025
ATREP2 1-564
d
0.94
12252118-12252465
ATMU9 1-339
c
0.91
12252904-12253147
ATCOPIA36_LTR 1-232
c
0.83
12264778-12264841
ATSINE3 34-97
c
0.86
12270336-12270896
ATHATN3A 1-584
c
0.84
12273179-12273388
ATCOPIA35_LTR 1-207
d
0.88
12273394-12273901
ATCOPIA40_I 917-1424
c
0.65
12273950-12274153
ATCOPIA65_I 690-893
c
0.68
12274189-12274772
ATCOPIA65_I 32-615
c
0.67
12274801-12274848
ATCOPIA35_I 1-48
c
0.83
12274849-12275128
ATCOPIA35_LTR 1-281
c
0.87
12275129-12276502
ATCOPIA35_I 2777-4148
c
0.75
12276503-12276737
ATCOPIA35_LTR 43-281
d
0.87
12286688-12287414
VANDAL18NA 1-726
d
0.94
12287415-12287712
VANDAL18NA 957-1261
d
0.91
12324909-12325145
ATHPOGON2 454-691
c
0.80
12325403-12325481
ATHPOGON2 42-133
c
0.83
12327632-12327699
ATSINE3 107-171
d
0.78
12328043-12328155
ATREP3 1986-2097
c
0.97
12328156-12328475
ATREP3 1308-1627
c
0.93
12328491-12328684
ATREP3 947-1140
c
0.96
12328834-12330167
ATREP3 1-1357
c
0.98
12334039-12334534
ATTIR16T3A 1-497
d
0.95
12336851-12337507
ARNOLDY2 9-650
d
0.90
12337264-12337289
ARNOLDY2 834-859
c
1.00
12337516-12337718
ARNOLDY2 767-983
d
0.94
12337754-12337958
ARNOLDY2 984-1179
d
0.91
12364251-12365149
ATREP3 1-902
d
0.96
12365150-12366106
ATREP3 1129-2097
d
0.97
12373573-12374206
ATHATN2 1-647
d
0.95
12403670-12404149
ATLANTYS2_I 2717-3197
c
0.72
12405400-12405550
TAT1_ATH 1540-1706
c
0.86
12405551-12406031
TAT1_ATH 1059-1539
c
0.85
12406824-12407362
ATCOPIA60LTR 1-539
d
1.00
12407363-12409575
ATCOPIA60_I 1-2213
d
1.00
12409576-12410113
ATCOPIA60LTR 1-539
d
0.97
12410262-12410610
ATCOPIA57_I 1119-1467
c
0.87
12410627-12410675
ATCOPIA57_I 853-901
c
0.76
12414124-12414576
ATCOPIA48_I 2966-3418
d
0.65
12439860-12440093
DT1 7-262
c
0.86
12457798-12457967
ATREP2 1-169
d
0.91
12457981-12458366
ATREP2 170-564
d
0.68
12469180-12469329
ATREP10C 1-164
d
0.75
12469332-12469722
ATREP10C 251-653
d
0.91
12470530-12471002
TAG2 1577-2052
d
0.67
12483205-12483641
ATLINE1_1 5414-5851
c
0.69
12500292-12500549
ATHPOGON1 43-326
c
0.67
12500553-12501028
ATHPOGON1 1-477
c
0.86
12501033-12501289
DT1 5-262
d
0.84
12502976-12503182
ATTIRTA1 1-206
d
0.79
12507178-12507496
ATREP11 729-1052
c
0.82
12513360-12513403
ATHILA4_LTR 207-250
d
0.80
12513412-12513838
ATHILA4_LTR 262-690
d
0.82
12513887-12513937
ATHILA4_LTR 775-825
d
0.80
12525207-12525233
ATHILA4C_I 5608-5634
c
1.00
12525695-12526619
ATREP11A 1-945
d
0.95
12530319-12530476
ATSINE1 21-174
c
0.89
12548073-12548468
ATHATN7 189-598
d
0.77
12562343-12563276
ATREP3 1148-2097
c
0.97
12563295-12564193
ATREP3 1-902
c
0.95
12565406-12565784
TAG3N1 2-379
d
0.81
12566356-12568390
ATGP2NLTR 1-2033
d
0.97
12569452-12569698
LIMPET1 1392-1637
c
0.90
12569699-12570604
ATGP2LTR 379-1287
c
0.87
12570648-12570952
ATGP2LTR 1-328
c
0.85
12570957-12572236
ATGP2I 3767-5047
c
0.94
12572252-12572344
ATGP2LTR 446-540
c
0.87
12572353-12572561
ATGP2LTR 216-437
c
0.77
12572562-12572825
ATGP2LTR 1-274
c
0.93
12572826-12572876
LIMPET1 1346-1396
c
0.94
12572880-12573076
LIMPET1 1345-1543
c
0.90
12582024-12582234
HELITRON1 6476-6697
c
0.77
12592071-12592122
ATGP8I 96-148
c
0.77
12592724-12592831
LIMPET1 1767-1874
c
0.72
12593098-12593375
LIMPET1 1360-1637
c
0.92
12603649-12603971
ATMUN1 45-400
c
0.88
12603987-12604018
ATMUN1 15-44
c
0.81
12618752-12619636
ATREP1 1-888
d
0.92
12622523-12622650
ATCOPIA85LTR 1-128
c
0.95
12626570-12627522
ATENSPM1 1-950
d
0.88
12627523-12627788
ATENSPM1 951-1204
d
0.91
12627789-12627859
ATENSPM1 1451-1520
d
0.86
12627861-12628157
ATENSPM1A 1470-1789
d
0.76
12628158-12628183
ATENSPM1A 1751-1775
d
0.85
12628184-12628196
ATENSPM1A 1470-1789
d
0.76
12628198-12628335
ATENSPM1A 1776-1910
d
0.91
12628352-12628411
ATENSPM1 2061-2120
d
0.97
12628412-12628621
ATENSPM1A 2051-2254
d
0.94
12628622-12629294
ATENSPM1 2359-3031
d
0.94
12629314-12629396
ATENSPM1 3269-3348
d
0.87
12629397-12629516
ATENSPM1A 2921-3031
d
0.75
12629545-12629650
ATENSPM1A 2890-2994
d
0.71
12629660-12629699
ATENSPM1 3569-3606
d
0.75
12629718-12630245
ATENSPM1 3607-4130
d
0.92
12630247-12630300
ATENSPM1A 3900-3946
d
0.86
12630301-12630660
ATENSPM1 4190-4548
d
0.89
12635095-12635650
HELITRONY1B 25-578
d
0.83
12635651-12635821
HELITRONY1B 579-747
d
0.83
12635853-12636309
HELITRONY1B 691-1165
d
0.83
12636311-12636570
HELITRONY1A 982-1224
d
0.89
12636571-12636677
HELITRONY1A 1132-1221
d
0.87
12636680-12636804
HELITRONY1A 1225-1348
d
0.85
12641026-12641164
ATCOPIA72LTR 35-169
c
0.79
12641196-12641250
ATCOPIA72_I 4426-4483
c
0.88
12641251-12642522
ATCOPIA72_I 3154-4425
c
0.79
12642548-12642686
ATCOPIA72LTR 35-169
c
0.79
12651523-12652012
ATHATN3A 1-524
d
0.86
12653198-12653491
TSCL 863-1221
d
0.82
12662850-12663014
ATSINE3 4-168
c
0.94
12664628-12664794
ATLANTYS2_LTR 28-194
c
0.97
12664807-12666681
ATLANTYS2_I 7436-9311
c
0.96
12666682-12666762
ATLANTYS2_I 7436-7516
c
0.93
12666763-12669732
ATLANTYS2_I 4572-7516
c
0.93
12669751-12670224
ATLANTYS2_I 3944-4465
c
0.95
12670225-12673280
ATLANTYS2_I 1-3094
c
0.96
12673281-12674082
ATLANTYS2_LTR 1-804
c
0.95
12674573-12685044
VANDAL16 1-10472
c
1.00
12688882-12689064
ATLINE1A 2064-2249
d
0.77
12691494-12691645
VANDAL14 12117-12268
c
0.78
12692397-12692616
VANDAL13 1-222
c
0.73
12700367-12700655
ATENSPM2 1013-1301
d
0.68
12700657-12700808
ATENSPM9 1453-1613
d
0.62
12700810-12700950
ATENSPM2 1456-1599
d
0.71
12700951-12701412
ATENSPM2 1600-2060
d
0.75
12710683-12710869
ATHILA7LTR 1241-1425
d
0.82
12713601-12728308
VANDAL2 1-14750
d
0.98
12728309-12728350
VANDAL2 14751-14792
d
0.98
12728367-12728548
VANDAL2 14777-14959
d
0.97
12728608-12728650
VANDAL2 15026-15068
d
1.00
12731992-12732484
ATDNAI27T9B 281-760
c
0.85
12733614-12733673
LIMPET1 1360-1420
d
0.84
12733675-12733873
LIMPET1 1221-1420
d
0.90
12733874-12734290
LIMPET1 1220-1637
d
0.94
12738426-12738823
BRODYAGA1 772-1174
c
0.74
12738824-12739047
BRODYAGA1 12-234
d
0.79
12739123-12739196
BRODYAGA1 820-893
c
0.71
12739200-12739313
BRODYAGA1 415-521
d
0.71
12739329-12739433
BRODYAGA1 522-627
d
0.78
12739738-12740117
BRODYAGA1 1-391
c
0.76
12753619-12754150
ATCOPIA93_I 2965-3495
d
0.74
12754170-12754347
ATCOPIA20I 3554-3738
d
0.68
12754355-12754859
ATCOPIA20I 3746-4250
d
0.75
12754862-12755172
ATCOPIA93_I 4240-4550
d
0.74
12755613-12755837
ATCOPIA20I 14-238
d
0.65
12755872-12756394
ATCOPIA93_I 303-819
d
0.71
12756451-12756750
ATCOPIA20I 858-1169
d
0.65
12756751-12757043
ATCOPIA20I 1170-1462
d
0.74
12757110-12758014
ATCOPIA20I 1529-2433
d
0.76
12758257-12758550
ATCOPIA93_I 2680-2979
d
0.70
12758553-12759222
ATCOPIA93_I 2982-3650
d
0.74
12759223-12759783
ATCOPIA20I 3690-4250
d
0.74
12759786-12760096
ATCOPIA93_I 4240-4550
d
0.74
12760503-12761687
ATDNAI27T9C 2-1191
c
0.95
12809827-12810168
ATREP11 1-349
d
0.93
12810169-12810322
ATREP11 892-1053
d
0.92
12814051-12815703
ROMANIAT5 390-2046
d
0.93
12815705-12815795
ATCOPIA29_I 2823-2913
d
0.73
12815800-12816093
ROMANIAT5 2155-2448
d
0.90
12816140-12816230
ATCOPIA27_I 5510-5596
d
0.74
12818386-12818647
VANDAL5 1-273
d
0.91
12818998-12819125
VANDAL5 482-609
d
0.98
12819204-12819898
VANDAL5 979-1697
d
0.94
12820122-12820339
VANDAL4 467-687
d
0.75
12820341-12823450
VANDAL5 1691-4785
d
0.98
12823452-12823886
VANDAL5 4787-5221
d
0.97
12823887-12824050
VANDAL5 4521-4684
d
0.94
12824058-12824426
VANDAL5 4370-4740
d
0.92
12824427-12826623
VANDAL5 4794-7013
d
0.97
12826624-12826920
VANDAL4 6036-6332
d
0.83
12826952-12827169
VANDAL4 6432-6650
d
0.84
12827190-12827319
VANDAL4 6710-6840
d
0.73
12827721-12827976
VANDAL4 10487-10742
c
0.83
12827977-12830409
VANDAL5 6997-9427
d
0.97
12830416-12831931
VANDAL4 3928-5432
c
0.96
12831933-12832251
VANDAL4 3500-3817
c
0.95
12832252-12832652
VANDAL5 10207-10625
d
0.92
12832653-12832819
VANDAL5 11208-11374
d
0.95
12832826-12832950
VANDAL5 10179-10346
d
0.85
12832951-12836125
VANDAL5 10928-14124
d
0.97
12836126-12839695
VANDAL5 14324-17915
d
0.96
12842271-12842996
ATCOPIA36_I 647-1370
d
0.97
12842997-12845050
ATCOPIA36_I 1548-3600
d
0.97
12845051-12845329
ATCOPIA36_I 3601-3950
d
0.95
12845330-12845558
ATCOPIA36_I 3951-4180
d
0.90
12845559-12845834
ATCOPIA36_LTR 1-273
d
0.91
12846073-12846221
SIMPLEHAT2 80-228
d
0.92
12846223-12846728
SIMPLEHAT2 648-1208
d
0.85
12848054-12848110
ATHILA4_LTR 496-551
d
0.82
12848112-12848759
ATHILA4_LTR 553-1207
d
0.86
12848760-12848810
ATHILA4C_I 1-52
d
0.94
12848916-12849007
ATHILA4C_I 156-247
d
0.83
12849013-12849724
ATHILA4C_I 252-948
d
0.74
12854408-12854950
ATHATN7 1-541
d
0.83
12854987-12855027
ATHATN7 557-598
d
0.83
12855276-12855969
ATREP3 248-953
c
0.94
12855970-12856105
ATREP3 1-137
c
0.94
12857650-12858242
TA11 3923-4515
c
0.66
12873752-12874392
ATREP10D 137-777
c
0.98
12874393-12874450
ATREP10D 31-88
c
0.98
12874474-12874559
ATREP10D 326-416
c
0.76
12874631-12874750
ATREP10D 609-736
c
0.77
12874760-12874992
ATREP10A 987-1230
c
0.84
12874993-12875573
ATREP10B 277-862
c
0.82
12875990-12876020
ATREP3 2067-2097
c
0.97
12876021-12876150
ATREP3 1692-1803
c
0.74
12876151-12876896
ATREP3 947-1691
c
0.96
12890093-12890370
ATHATN2 11-291
d
0.87
12895443-12896050
BRODYAGA1 575-1184
c
0.72
12896255-12896607
BRODYAGA1 2-354
c
0.78
12899990-12900237
ATLINE1_5 5988-6238
c
0.75
12900241-12900550
ATLANTYS2_LTR 483-797
d
0.74
12904132-12904292
ATREP10B 1-166
c
0.78
12906678-12906750
LIMPET1 1360-1433
d
0.88
12906751-12906937
LIMPET1 1233-1420
d
0.90
12906938-12907355
LIMPET1 1220-1637
d
0.95
12907844-12907969
LIMPET1 1750-1874
d
0.90
12927031-12927303
ATMU10 4406-4702
c
0.82
12931970-12932049
ATMU10 2389-2468
d
0.94
12942634-12942972
ATSINE4 1-339
d
0.95
12942973-12943448
ATENSPM3 14-501
d
0.97
12943450-12943625
ATENSPM3 559-733
d
0.95
12943731-12946345
ATENSPM3 732-3350
d
0.98
12946354-12947124
ATENSPM3 7673-8456
d
0.97
12949951-12950550
ATENSPM5 5-593
d
0.91
12950551-12951307
ATENSPM6 590-1346
d
0.96
12951308-12951445
ATENSPM5 5720-5857
d
0.91
12951451-12951746
ATENSPM5 6304-6618
d
0.79
12951751-12953350
ATENSPM5 6474-8063
d
0.96
12953359-12953393
ATENSPM5 8068-8101
d
0.80
12953409-12953449
ATENSPM5 8102-8141
d
0.90
12953450-12953988
ATENSPM5 8179-8717
d
0.89
12961943-12962175
ATMUNX1 145-377
c
0.76
12976248-12976448
ATHPOGON1 314-514
c
0.87
12976450-12976723
ATHPOGON1 1-299
c
0.79
12993110-12993283
ATREP2 392-564
c
0.93
12993426-12993532
ATREP14 270-388
c
0.80
12993543-12993707
ATREP14 1-188
c
0.86