Chromosome IV
TE
Positions
Strand
Identity (%)
5000001-5000433
ATCOPIA45_I
3512-3947
d
0.72
5000448-5000677
ATCOPIA65_I
3933-4164
d
0.71
5009576-5010475
ATREP9
5-899
d
0.93
5010476-5010521
ATREP9
4-51
d
0.79
5019840-5020110
ATREPX1
1004-1283
c
0.74
5020502-5020894
ATREPX1
1021-1406
c
0.69
5028751-5028792
ATREP10A
209-250
d
0.95
5028793-5029035
ATREP10A
251-461
d
0.83
5029036-5029063
ATREP10
418-445
d
0.96
5029064-5029465
ATREP10A
462-864
d
0.98
5029471-5029515
ATREP10
466-513
d
0.85
5029518-5029982
ATREP10A
917-1380
d
0.99
5031875-5032356
ATCOPIA49LTR
1-502
d
0.98
5032357-5036570
ATCOPIA49_I
1-4216
d
1.00
5036571-5037111
ATCOPIA49LTR
1-502
d
0.97
5036977-5036996
ATCOPIA49LTR
368-412
d
0.87
5037002-5037021
ATCOPIA49LTR
368-412
d
0.87
5044351-5046849
VANDAL8
612-3111
c
0.98
5062990-5063349
ATCOPIA42LTR
931-1295
c
0.80
5063351-5063520
ATCOPIA42LTR
679-847
c
0.78
5063526-5063596
ATCOPIA41LTR
1-69
c
0.73
5064615-5064653
HELITRONY1B
1023-1060
d
0.90
5066597-5067142
ATHATN3
4-554
d
0.80
5074787-5074908
AT9NMU1
1-122
d
0.97
5074960-5075634
AT9NMU1
251-926
d
0.99
5075751-5076007
ATTIRTA1
1-261
d
0.92
5078186-5079818
AT9TSD1
2-1633
d
0.97
5079819-5080378
ATREP2
2-564
d
0.95
5080379-5080961
AT9TSD1
1633-2216
d
0.96
5090462-5090746
ATHATN4
16-283
d
0.83
5104923-5105045
ATREP13
1-123
d
0.96
5105046-5105421
ATREP13
251-648
d
0.95
5121997-5122354
ATREP6
1-427
d
0.87
5122355-5122497
ATREP11
912-1053
c
0.87
5122520-5122665
ATREP11
762-911
c
0.61
5122672-5123247
ATREP11
158-735
c
0.87
5123252-5123760
ATREP6
458-950
d
0.92
5123762-5123950
ATREP6
951-1157
d
0.88
5123951-5123982
ATREP6
1158-1189
d
0.94
5126370-5126537
ARNOLDY1
58-241
d
0.90
5129643-5130793
ATREP3
947-2097
c
0.95
5132261-5132513
ARNOLDY1
1-257
c
0.82
5132656-5132842
ATREP14
464-652
d
0.94
5132851-5133704
ATREP1
1-869
c
0.96
5136559-5136783
ATREP10B
372-628
c
0.76
5136784-5136999
ATREP10B
167-371
c
0.84
5137000-5137028
ATREP10B
1-29
c
0.93
5137351-5137954
ATREP13
17-643
c
0.95
5142925-5143076
ATREP3
1-154
d
0.94
5143077-5143479
ATREP3
251-655
d
0.95
5162169-5164421
VANDAL1N1
25-2265
c
0.97
5162818-5162850
VANDAL1N1
1625-1657
c
0.97
5178671-5179080
ATCOPIA44LTR
16-416
c
0.75
5180962-5181470
ATHPOGON1
1-538
c
0.89
5203215-5203363
ATLINE1_3A
167-327
d
0.73
5207456-5208294
ATREP1
1-888
d
0.93
5216905-5217188
ATMU10
4408-4703
c
0.83
5217253-5217537
ATMU10
4406-4703
d
0.83
5238176-5238251
ATREP6
1088-1163
c
0.83
5238264-5238794
ATREP6
540-1087
c
0.86
5238795-5239027
ATREP6
310-539
c
0.91
5239084-5239336
ATREP6
1-257
c
0.88
5243499-5243550
ATREP3
1-58
d
0.96
5243551-5243629
ATREP3
59-140
d
0.90
5243630-5244085
ATREP3
251-709
d
0.95
5244528-5244762
ATHATN7
75-311
c
0.85
5245064-5245643
ATHATN7
12-583
c
0.82
5255112-5255234
ATSINE3
1-123
c
0.89
5296445-5296867
ATLINE1_5
5951-6373
d
0.73
5296870-5297324
ATLINE1_4
6251-6700
d
0.71
5303629-5303930
ATREP13
1-320
d
0.89
5303948-5304496
ATREP2
1-564
c
0.91
5304497-5304783
ATREP13
366-648
d
0.86
5307014-5307540
ATREP3
1480-2016
d
0.80
5310259-5310728
ATHATN5
31-541
d
0.83
5314870-5314954
ATTIR16T3A
288-385
c
0.88
5314955-5315228
ATTIR16T3A
6-288
c
0.87
5324210-5324374
ATSINE3
1-165
c
0.88
5338382-5338646
TSCL
959-1224
c
0.72
5340735-5341088
ATREP14
357-735
c
0.91
5341089-5343520
ATDNAI26T9
1-2432
d
1.00
5343522-5343883
ATREP14
1-364
c
0.93
5359301-5359796
ATHPOGON1
1-514
d
0.89
5378551-5378643
ATREP2
451-542
c
0.89
5378659-5379113
ATREP2
1-450
c
0.70
5391092-5391263
ATREP1
717-888
c
0.93
5391305-5391493
ATREP14
120-346
c
0.73
5391529-5391689
ATREP14
1-188
c
0.88
5394271-5394431
VANDAL22
1-161
c
0.78
5431887-5432573
ATCOPIA50LTR
1-687
d
1.00
5432574-5436851
ATCOPIA50_I
1-4278
d
1.00
5436852-5437541
ATCOPIA50LTR
1-687
d
0.97
5443883-5444211
ATSINE4
3-332
c
0.86
5454837-5455004
ATHATN4
273-437
d
0.84
5458725-5459032
ATTIRX1B
2-319
c
0.88
5468588-5468986
ATREP11
646-1053
c
0.89
5468987-5469727
ATREP11
1-735
c
0.88
5470110-5470741
ATREP13
1-648
c
0.95
5492866-5493116
DT1
1-257
d
0.87
5493789-5494946
ATGP1LTR
1-1160
c
0.97
5494951-5499093
ATGP1I
1830-5973
c
0.98
5499096-5500000
ATGP1I
490-1431
c
0.97
5500001-5500477
ATGP1I
1-489
c
0.99
5500478-5501634
ATGP1LTR
1-1160
c
0.98
5501820-5502750
ATREP11A
1-947
d
0.93
5509765-5509795
HELITRONY1B
1031-1061
d
1.00
5526577-5526837
DT1
1-262
c
0.82
5542576-5542659
ATHATN8
166-248
c
0.87
5543947-5544052
ATREPX1
1454-1550
c
0.79
5544065-5544268
ATREPX1
1228-1453
c
0.80
5545939-5546108
SIMPLEHAT2
1-167
d
0.86
5548659-5548908
ATTIRTA1
1-258
d
0.83
5553201-5553573
ATCOPIA7LTR
1-373
d
1.00
5553574-5557910
ATCOPIA7I
1-4337
d
1.00
5557911-5558283
ATCOPIA7LTR
1-373
d
0.99
5560052-5560303
ATTIRTA1
1-259
c
0.77
5589351-5589767
ATREP10C
12-411
d
0.82
5589768-5590019
ATREP10C
1-233
d
0.82
5590039-5590221
ATREP10C
259-437
d
0.88
5590415-5590632
ATREP10C
433-653
d
0.89
5597504-5598002
ATTIR16T3A
1-501
d
0.95
5603281-5603850
ATREP14
1-570
d
0.96
5603851-5603877
ATREP14
571-598
d
0.96
5603892-5604022
ATREP14
599-732
d
0.74
5611426-5611728
ATLINE1_3A
33-328
c
0.76
5625463-5625952
ATREP2
1-491
d
0.92
5646320-5646610
TA12
440-726
d
0.69
5648803-5649129
HELITRONY1A
1012-1347
c
0.74
5649150-5649719
HELITRONY1B
17-592
c
0.86
5652033-5652077
AR12
119-162
d
0.80
5687822-5688026
ATCOPIA17LTR
1-205
d
1.00
5688051-5693060
ATCOPIA17I
25-5034
d
1.00
5693061-5693265
ATCOPIA17LTR
1-205
d
0.98
5721101-5722170
ATREP10B
728-1806
d
0.98
5722201-5722504
ATREP10B
1-301
c
0.89
5754654-5755193
ATHPOGON1
1-538
d
0.88
5772713-5773282
ATREP4
1-570
d
0.94
5773291-5773374
ATREP4
1066-1150
d
0.89
5773375-5773595
ATREP4
1151-1425
d
0.96
5773657-5774369
ATREP4
1528-2240
d
0.95
5786519-5787005
ATHATN3
1-554
d
0.86
5810585-5810951
SIMPLEHAT2
37-404
d
0.93
5840879-5841295
ATHATN4
1-434
c
0.87
5850286-5850696
ATCOPIA42LTR
912-1322
c
0.81
5850697-5850841
ATCOPIA42LTR
679-828
c
0.86
5850844-5850936
ATCOPIA42LTR
601-686
c
0.81
5854919-5855071
ATSINE1
23-175
c
0.82
5859423-5860016
ATREP2
1-564
c
0.72
5872859-5873150
SIMPLEHAT2
907-1208
c
0.94
5873151-5873636
SIMPLEHAT2
1-485
c
0.96
5875889-5875991
ATREP10
4-103
c
0.71
5875992-5876850
ATREP10
36-899
c
0.94
5876851-5876885
ATREP10A
1-35
c
0.94
5876960-5877149
ATREP10
34-219
c
0.73
5879353-5880301
ATCOPIA22I
3561-4509
c
0.76
5880351-5880901
ATCOPIA22I
2961-3511
c
0.79
5880902-5881050
ATCOPIA22I
2809-2960
c
0.67
5881414-5882548
ATCOPIA22I
1327-2460
c
0.78
5882556-5882729
ATCOPIA22I
1161-1319
c
0.75
5882730-5882833
ATCOPIA22I
1054-1160
c
0.75
5882838-5882895
ATCOPIA22I
998-1052
c
0.77
5882915-5883022
ATCOPIA22I
853-960
c
0.79
5883051-5883750
ATCOPIA22I
107-806
c
0.81
5883751-5883856
ATCOPIA22I
1-106
c
0.71
5901348-5901663
ATLINE1_3A
13-324
d
0.68
5905435-5905659
ATDNATA1
15-241
d
0.85
5957138-5957265
ATCOPIA57LTR
110-239
c
0.76
5957344-5957658
ATCOPIA57_I
1141-1467
c
0.87
5958636-5958763
ATCOPIA57LTR
110-239
c
0.76
5959558-5959607
ATLINE1_3A
42-91
c
0.74
5960110-5960379
ATLINE1_3A
57-328
c
0.69
5992893-5993016
ATREP4
1-123
d
0.94
5994022-5994101
ATDNA1T9A
1862-1945
c
0.91
5994106-5994416
ATDNAI27T9C
743-1071
c
0.85
5994789-5994940
VANDAL5
17766-17915
c
0.92
5995408-5995575
VANDAL5
16591-16765
c
0.77
5995602-5995808
ATDNA1T9A
1719-1931
c
0.79
5995871-5996025
ATDNAI27T9C
915-1071
c
0.77
5996032-5996249
ATDNA1T9A
1710-1931
c
0.79
5996516-5997031
VANDAL5
1-514
c
0.97
5997032-5997653
ATREP4
115-752
d
0.95
5997654-5998650
ATREP4
815-1850
d
0.94
5998651-5998825
ATREP4
1851-2014
d
0.77
5998851-5999268
ATREP2
2-422
c
0.91
5999269-5999580
ATREP4
1928-2240
d
0.95