Repbase Reports

2023, Volume 23, Issue 6
June 16, 2023
Copyright © 2001-2023 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 4291

SINE2-5_Sre

SINE2-5_Sre, a novel SINE retroposon from the Stevia rebaudiana genome.

Submitted:
05-Jun-2023
Accepted:
16-Jun-2023
Key Words:
SINE2/tRNA; SINE; Non-LTR Retrotransposon; Transposable Element; SINE2-5_Sre
Source:
Stevia rebaudiana
Organism:
Stevia rebaudiana
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Eupatorieae; Stevia
[] Authors:
Grabiele,M. and Aguilera,P.M.
Title:
SINE retroposons from plant genomes.
Journal:
Repbase Reports 23(6), 4291-4291 (2023)
Abstract:
Analyzed genome: assembly of Xu et al. (2021) (NCBI BioProject PRJNA684944). Consensus of 50 seqs; mean 94.17% identity to consensus. Additional features: tRNA related region (1-93); A box (13-24); B box (69-79); tRNA-unrelated region (94-252); poly A tail (253-261).
Derived:
Download Sequence - Format:
IG, EMBL, FASTA
References:

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