Repbase Reports

2023, Volume 23, Issue 6
June 16, 2023
Copyright © 2001-2023 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 4172

SINE2-3_Lsa

SINE2-3_Lsa, a novel SINE retroposon from the Lactuca sativa genome.

Submitted:
05-Jun-2023
Accepted:
16-Jun-2023
Key Words:
SINE2/tRNA; SINE; Non-LTR Retrotransposon; Transposable Element; SINE2-3_Lsa
Source:
Lactuca sativa
Organism:
Lactuca sativa
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
[] Authors:
Grabiele,M. and Aguilera,P.M.
Title:
SINE retroposons from plant genomes.
Journal:
Repbase Reports 23(6), 4172-4172 (2023)
Abstract:
Analyzed genome: Lactuca sativa v8 (Phytozome). Consensus of 50 seqs; mean 98.23% identity to consensus. Additional features: tRNA-related region (1-90); A box (15-25); B box (66-76); tRNA-unrelated region (91-217); poly A tail (218-227). 98.80% similar to AsteS-II.
Derived:
Download Sequence - Format:
IG, EMBL, FASTA
References:

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