Repbase Reports |
|---|
| 2023, Volume 23, Issue 6 |
| June 16, 2023 |
| Copyright © 2001-2023 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 4231 |
SINE2-2a_Fxa |
|||
|---|---|---|---|
SINE2-2a_Fxa, a novel SINE retroposon from the Fragaria x ananassa genome. |
|||
|
Submitted: 05-Jun-2023 |
Accepted: 16-Jun-2023 |
||
|
Key Words: SINE2/tRNA; SINE; Non-LTR Retrotransposon; Transposable Element; SINE2-2a_Fxa |
|||
|
Source: Fragaria x ananassa |
Organism: Fragaria x ananassa |
Taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria |
|
| [] |
Authors: Grabiele,M. and Aguilera,P.M. |
||
|
Title: SINE retroposons from plant genomes. |
|||
|
Journal: Repbase Reports 23(6), 4231-4231 (2023) |
|||
Abstract: Analyzed genome: Fragaria x ananassa v1.0.a1 (Phytozome). Consensus of 30 seqs; mean 90.74% identity to consensus. Additional features: tRNA-related region (1-113); A box (13-23); B box (89-99); tRNA-unrelated region (114-192); poly A tail (193-201). SINE2-2_Fxa variants a to c share 88.20% similarity. 98.30% similar to SINE2-2_Fv.
|
|||
|
Derived: |
|||
|
Download Sequence - Format: IG, EMBL, FASTA |
|||
|
References: |
|||