Repbase Reports |
|---|
| 2023, Volume 23, Issue 6 |
| June 16, 2023 |
| Copyright © 2001-2023 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 4244 |
SINE2-11a_Egr |
|||
|---|---|---|---|
SINE2-11a_Egr, a novel SINE retroposon from the Eucalyptus grandis genome. |
|||
|
Submitted: 05-Jun-2023 |
Accepted: 16-Jun-2023 |
||
|
Key Words: SINE2/tRNA; SINE; Non-LTR Retrotransposon; Transposable Element; SINE2-11a_Egr |
|||
|
Source: Eucalyptus grandis |
Organism: Eucalyptus grandis |
Taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus |
|
| [] |
Authors: Grabiele,M. and Aguilera,P.M. |
||
|
Title: SINE retroposons from plant genomes. |
|||
|
Journal: Repbase Reports 23(6), 4244-4244 (2023) |
|||
Abstract: Analyzed genome: Eucalyptus grandis v2.0 (Phytozome). Consensus of 25 seqs; mean 88.88% identity to consensus. Additional features: tRNA-related region (1-82); A box (14-25); B box (58-68); tRNA-unrelated region (83-205); poly A tail (206-218). First 158 nt similar to SINE2-1_Egr. SINE2-11_Egr variants a and b share 89.90% similarity.
|
|||
|
Derived: |
|||
|
Download Sequence - Format: IG, EMBL, FASTA |
|||
|
References: |
|||