Repbase Reports

2023, Volume 23, Issue 5
May 24, 2023
Copyright © 2001-2023 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 3156

hAT-5_Ipa

hAT-5_Ipa, a novel transposon from the Ilex paraguariensis genome.

Submitted:
12-May-2023
Accepted:
24-May-2023
Key Words:
hAT; DNA transposon; Transposable Element; hAT-5_Ipa
Source:
Ilex paraguariensis
Organism:
Ilex paraguariensis
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Aquifoliales; Aquifoliaceae; Ilex
[] Authors:
Aguilera,P.M. and Grabiele,M.
Title:
hAT transposons from the yerba mate genome.
Journal:
Repbase Reports 23(5), 3156-3156 (2023)
Abstract:
De novo search via RepeatModeler from GCA_905181385.1; CDS predicted via Fgenesh and protein annotated via InterProScan. Consensus of 25 seqs; mean 90.81% identity to consensus. Additional features: 17 nt TIRs 94.10% identity; 8 nt TSDs.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

© 2001-2023 - Genetic Information Research Institute