Repbase Reports
2023, Volume 23, Issue 4
April 27, 2023
Copyright © 2001-2023 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 2224

Mariner-26_OT

DNA transposon, consensus.

Submitted:
26-Sep-2014 		Accepted:
27-Apr-2023
Key Words:
Mariner/Tc1; DNA transposon; Transposable Element; Mariner-26_OT
Source:
Oxytricha trifallax 		Organism:
Oxytricha trifallax 		Taxonomy:
Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Spirotrichea; Stichotrichia; Sporadotrichida; Oxytrichidae; Oxytrichinae; Oxytricha
[] Authors:
Bao,W.
Title:
DNA transposons from the Oxytricha trifallax micronuclear genome.
Journal:
Repbase Reports 23(4), 2224-2224 (2023)
Abstract:
>99% identical to the consensus. >Mariner-26_OT_1p 611-3265 MRQKETKYTQFEVLLGIKTIKIALFLNQDSRLIVYNLNFQIQISQQSGKS MLNPKNLEILEASMNFKSLKRDLASENINSIKSLEFQKRPPQSVIQQRVQ KGDQQTEENLSQPERKRGRKPQYLNAKFPELIDKAKLILPHHSYDISKIL EMEEFKPLIGSQDLSRYLSKFILNKTTKNQTKSVKDKSIGKISLTKHLIN NQTDFIEVGMPHFPGEDLKPVQIDNLNSQVNYGAKIQSEITSIYIREYII LKPQGRQDFIHKIFNRNSQSLMEFLQNLKTACSENLYENMFRLIYELNMS SSVNLSIKTRLFVSSLLYYNHEIIEIDQDLLKSSMLLLAQRPNTEQALGL SNYIFINEPQCLEKLQEEVFNLDKSNIGIIPLMIGTFQLFKIDSQAVRLL PNTLLCLNKAFIQILKEDQGLRLIRHVPINVVGDFIQICALSSSPSFQKL DKFINTMSEIFIQKWDYIDQEDFTFFLQSVSLELKQRNPLWVNKIDELSE LSNNLAFIQQEKGIRCRRDIIIDCLKADFTKLNLLMHTPNKANDFNEQEL KQIISKFKKLNSDSIQVQDFCLKMQLQAFNESKQLKLFQQLMGFSFLSLQ KLCLNFLMWQNQKFTFINFGVGNGKTLLCSTNAILLAQQHREPVFVIGKN EHLVLRDEKNFEKLIIGLSLNVNVNQYSSLPGVYYLTQKVLENVSANQDF KDIWKNSFVIIDEYDWILLEGCVKQIXDLFDLISTAKGIVGFTGSVISQK ELSCLKVAFDTEETVFPKLSCLMGDKRVKLQQELVSSNQVDYCKRIYEIC LKYCKLTPVLIVAQQSYTIIENYFXKFAYIPFHSMKNVKGPKLEVQFEQQ FSQKNIDGQFGVFLMNEQQGRGTDFKTSHEIEFN >Mariner-26_OT_2p 3428-4144 MENQAHLKLGALQTYLGILKGSQSKSMQDIKRSRMECKAAIDVSINANEV SVHSFQNHDSSIQNIMNSSSSQSENAYLNDQSGLQLSQSNLAPSQEQPKI LKDASEASISEQSLPLTENEVNKSADFMEEVQDKIEKELPGKKNKRQIKQ DSKARVKTEKIDPEAQQVVENSIDLSGKNLAKKSLNKNKLAEQNASQKID SIVGLNRYGRNIMRRAVTSDNQAITTKKRQKQSVIQSL >Mariner-26_OT_3p (DDE-Tpase) 5276-6910 MERLKQSDIRNFYKHNTDNSSQDSFESDASSEMKDLNQSSLVIKLNYIST QLIKAQISQEGPIQIVELDLDENNRIESQLLEQSRQKNYPSQIIDPFAQL EQIKQNTTIEQYFSRELITDYLEKACILHFRLQLGQNMDNESKVYNETHS KQVFQQFKKQCETAALIDDKEELHLQASQIQNIKAEQNVWKKKQKPISTQ GMESRLYSLYENFKVSKQALTRRFKVSYYRVNQIIQKFEKSRSTQNYENQ QIKAYKLSGVALLISKIVQQHQGLVSLQQISSLLKTSFDVNQSISQIRII MRKHLHYSFKKIYYLDKRSSNYRSKSLRRLAAANYIQLLFDNKIIINVDE SSIQHNNPSQKGWGPIGXQSFSTLKRRVSKLNIIAAAFSDGQMHFTVNSG RNNSLSFYNFILKLCCLLEKQDQTWREKFIVQXDNATYHKSSFVREKFKL LKIPIVFLGPYQFNLAPVEKIFAHIKSFYFDSKFFNTGNKQVNSQFLFLT NLFRKQMILNYANHIRSLNFNWLPKAYLKSLNFAMLYLTEADSC >Mariner-26_OT_4p 8677-7889 MEFVEQIMKGFALNCFIERINNLQPFNFRVMAKRFTQEADSNNCRCCRLG SSKIIQEQRVIEQKYKYFNILIVINLYIQLKTDPDSLNIQKIVRNIXRTD SYSFLQFYLFLYCFIIAMNKCFIKNQKNKINLLSNIYKIQFQIMSYQSKK XNSIKIELVLLKTKEIIIKMLKNQKYLKRRFQLPKLLQKVSLIKENQIQI IIQSQDKQEHPHVSVLHVSVIKMSSFSIYKKKLKKNKIYYNYLVYSIRQE RLFNSQRVIIGK >Mariner-26_OT_5p (methylase) 9061-10254 MILKDSINSNQELHDQLYKLANGQCKSEQNEPFNESINIQQQESNSQNQK SEKNKNSQKICQNEKSCKNRMCMNEKKQMKQKYLEQCHYYELKIATLIDQ IRSYEDLITILNDQFGERFRKIVEQVINEFSEDEIKKIQNQDQELDQEED LDLTDSQQSQNQNKRALIKTEDIVENLVLKEKEYQLKFFKWGMRQIKNGS VQYQGSIQNPEVWNQIKKDYKVDKCGNRFDVLLSDGPWDQTACNLNYPTL KDREFLDKIPLEDLQKDGYYFMWITNKKLEAALKHLDDHNYERVEIITWI KIDKKQIIREGIGYFLRHCYEFCIMARNKGPFSCLRQKSKTHSAPNVIFA ELREQSRKPDQIYEIIEQLVPGGRYLELFPRPHNQRVKRTGLGRESI.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Chen,X., Bracht,J.R., Goldman,A.D., Dolzhenko,E., Clay,D.M., Swart,E.C., Perlman,D.H., Doak,T.G., Stuart,A. et al.
    The Architecture of a Scrambled Genome Reveals Massive Levels of Genomic Rearrangement during Development.
    Cell 158(5), 1187-1198 (2014)

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