Repbase Reports |
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| 2023, Volume 23, Issue 1 |
| January 25, 2023 |
| Copyright © 2001-2023 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 612 |
SINE2-3_Stu |
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SINE2-3_Stu, a novel SINE retroposon from the Solanum tuberosum genome. |
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Submitted: 27-Dec-2022 |
Accepted: 25-Jan-2023 |
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Key Words: SINE2/tRNA; SINE; Non-LTR Retrotransposon; Transposable Element; SINE2-3_Stu |
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Source: Solanum tuberosum |
Organism: Solanum tuberosum |
Taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum |
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Authors: Grabiele,M. and Aguilera,P.M. |
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Title: SolS-X, a novel SINE retroposon family from Solanaceae. |
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Journal: Repbase Reports 23(1), 612-612 (2023) |
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Abstract: Analyzed genome: GCF_000226075.1. Consensus of 100 seqs; mean 81.38% identity to consensus. Additional features: tRNA related region (1-82); A box (14-24); B box (58-68); tRNA-unrelated region (83-117); poly A tail (118-126); SolS-X consenus sequences in seven genera of Solanaceae, including SINE2-9_Cba, share 89.00% similarity.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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