Repbase Reports

2023, Volume 23, Issue 1
January 25, 2023
Copyright © 2001-2023 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 596

Mariner-N1a_Cch

Mariner-N1a_Cch, a novel transposon from the Capsicum chinense genome.

Submitted:
28-Dec-2022
Accepted:
25-Jan-2023
Key Words:
Mariner/Tc1; DNA transposon; Transposable Element; Nonautonomous; Mariner-N1a_Cch
Source:
Capsicum chinense
Organism:
Capsicum chinense
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
[] Authors:
Grabiele,M. and Aguilera,P.M.
Title:
Short transposons from the Capsicum chinense genome.
Journal:
Repbase Reports 23(1), 596-596 (2023)
Abstract:
Analyzed genome: GCA_002271895.2. Consensus of 25 seqs; mean 80.91% identity to consensus. Additional features: 36 nt TIRs 73.60% identity; TA TSDs; 96.70% similar to Mariner-N1a_Cba. Mariner-N1a_Cch and Mariner-N1b_Cch share 81.80% similarity.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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