Repbase Reports

2022, Volume 22, Issue 6
June 25, 2022
Copyright © 2001-2022 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 3386

Cassandra-1B_RSa-LTR

LTR retrotransposon from the radish genome - long terminal repeat consensus.

Submitted:
05-Oct-2020
Accepted:
25-Jun-2022
Key Words:
LTR Retrotransposon; Transposable Element; Nonautonomous; Cassandra-1B_RSa-LTR
Source:
Raphanus sativus
Organism:
Raphanus sativus
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
[] Authors:
Kojima,N.F. and Kojima,K.K.
Title:
Cassandra-type non-autonomous LTR retrotransposon families from the plant genomes.
Journal:
Repbase Reports 22(6), 3386-3386 (2022)
Abstract:
~98% identical to consensus. 13-bp TIRs. The consensus is ~96% identical to that of Cassandra-1_RSa-LTR.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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