Repbase Reports

2022, Volume 22, Issue 11
November 26, 2022
Copyright © 2001-2022 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 7288

hAT-N3a_Cba

hAT-N3a_Cba, a novel transposon from the Capsicum baccatum genome.

Submitted:
08-Nov-2022
Accepted:
26-Nov-2022
Key Words:
hAT; DNA transposon; Transposable Element; Nonautonomous; hAT-N3a_Cba
Source:
Capsicum baccatum
Organism:
Capsicum baccatum
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
[] Authors:
Aguilera,P.M. and Grabiele,M.
Title:
Short transposons from the Capsicum baccatum genome.
Journal:
Repbase Reports 22(11), 7288-7288 (2022)
Abstract:
De novo TE library from GCA_002271885.2. Consensus of 40 seqs; mean 85.58% identity to consensus. Additional features: 12 nt TIRs 91.70% identity; 63.65% similar to hAT-N8_SLy of Repbase. There exist two major subpopulations of hAT-N3_Cba (a and b) which consensus share 85.40% sequence similarity.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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