Repbase Reports |
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| 2022, Volume 22, Issue 11 |
| November 26, 2022 |
| Copyright © 2001-2022 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 7278 |
Mariner-N2d_Cba |
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Mariner-N2d_Cba, a novel transposon from the Capsicum baccatum genome. |
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Submitted: 08-Nov-2022 |
Accepted: 26-Nov-2022 |
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Key Words: Mariner/Tc1; DNA transposon; Transposable Element; Nonautonomous; Mariner-N2d_Cba |
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Source: Capsicum baccatum |
Organism: Capsicum baccatum |
Taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum |
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Authors: Aguilera,P.M. and Grabiele,M. |
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Title: Short transposons from the Capsicum baccatum genome. |
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Journal: Repbase Reports 22(11), 7278-7278 (2022) |
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Abstract: De novo TE library from GCA_002271885.2. Consensus of 20 seqs; mean 88.14% identity to consensus. Additional features: 32 nt TIRs 98.40% identity; TA TSDs; 73.30% similar to Mariner-N12_STu of Repbase. There exist four major subpopulations of Mariner-N2_Cba (a, b, c and d) which consensus share 65.20% sequence similarity.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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