Repbase Reports

2021, Volume 21, Issue 8
August 24, 2021
Copyright © 2001-2021 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 4616

SINE2-8_Csi

SINE2-8_Csi, a novel SINE retroposon from the tea genome.

Submitted:
15-Aug-2021
Accepted:
24-Aug-2021
Key Words:
SINE2/tRNA; SINE; Non-LTR Retrotransposon; Transposable Element; SINE2-8_Csi
Source:
Camellia sinensis
Organism:
Camellia sinensis
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia
[] Authors:
Grabiele,M. and Aguilera,P.M.
Title:
Retroposons from the tea genome (Camellia sinensis).
Journal:
Repbase Reports 21(8), 4616-4616 (2021)
Abstract:
1..92 /feature="tRNA-related region" 15..25 /feature="A box" 68..78 /feature="B box" 93..192 /feature="tRNA-unrelated region" 193..205 /feature="tail" Analyzed genome of tea: GCA_013676235.1. This consensus is generated from 50 entire length sequences with mean 84.4% identity to consensus. The tRNA-unrelated region is 95% similar to that of Anakin. This element is 87.6% similar to SINE2-1B_VMa.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

© 2001-2021 - Genetic Information Research Institute