Repbase Reports

2021, Volume 21, Issue 12
December 21, 2021
Copyright © 2001-2021 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 7341

RTE-1_Ipa

RTE-1_Ipa family.

Submitted:
08-Dec-2021
Accepted:
21-Dec-2021
Key Words:
RTE; Non-LTR Retrotransposon; Transposable Element; Nonautonomous; RTE-1_Ipa
Source:
Ilex paraguariensis
Organism:
Ilex paraguariensis
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Aquifoliales; Aquifoliaceae; Ilex
[] Authors:
Aguilera,P.M. and Grabiele,M.
Title:
RTE-1_Ipa, a family of non-LTR retrotransposons from the yerba mate genome.
Journal:
Repbase Reports 21(12), 7341-7341 (2021)
Abstract:
De novo TE library from GCA_905181385.1. Consensus of 15 seqs; 12 with both termini and poly GGTTT tail and 3 just truncated near 5 prime end; mean 82.4% identity to consensus. Additional features: all genomic copies are nonautonomous; 14>15>17>16>10 nt TSDs.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

© 2001-2022 - Genetic Information Research Institute