Repbase Reports

2021, Volume 21, Issue 10
October 24, 2021
Copyright © 2001-2021 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 5420

hAT-1c_Ipa

hAT-1c_Ipa member of the family.

Submitted:
22-Sep-2021
Accepted:
24-Oct-2021
Key Words:
hAT; DNA transposon; Transposable Element; Nonautonomous; hAT-1c_Ipa
Source:
Ilex paraguariensis
Organism:
Ilex paraguariensis
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Aquifoliales; Aquifoliaceae; Ilex
[] Authors:
Aguilera,P.M. and Grabiele,M.
Title:
hAT-1_Ipa, a family of hAT transposons from the yerba mate genome.
Journal:
Repbase Reports 21(10), 5420-5420 (2021)
Abstract:
De novo TE library from GCA_905181385.1. Consensus of 6 total genomic TIR to TIR length copies; mean 83.8% identity to consensus. Additional features: 8 nt TSDs; 12 nt TIRs; all copies are nonautonomous with the expected ORF at position 1285 to 3426 of the consensus.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

© 2001-2021 - Genetic Information Research Institute