Repbase Reports
2020, Volume 20, Issue 9
September 28, 2020
Copyright © 2001-2020 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 2624

Retrozyme-1_ALy-LTR

LTR retrotransposon from the Arabidopsis lyrata genome - long terminal repeat consensus.

Submitted:
01-Jul-2019 		Accepted:
28-Sep-2020
Key Words:
LTR Retrotransposon; Transposable Element; Nonautonomous; Retrozyme-1_ALy-LTR
Source:
Arabidopsis lyrata 		Organism:
Arabidopsis lyrata 		Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
[] Authors:
Kojima,K.K.
Title:
LTR retrotransposons from the Arabidopsis lyrata genome.
Journal:
Repbase Reports 20(9), 2624-2624 (2020)
Abstract:
~88% identical to consensus. The hammerhead ribozyme corresponds to the sequence 212-272.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Cervera,A., Urbina,D. and de la Pena,M.
    Retrozymes are a unique family of nonautonomous retrotransposons with hammerhead ribozymes that propagate in plants through circular RNAs.
    Genome Biology 17, 135-135 (2016)

© 2001-2024 - Genetic Information Research Institute