Repbase Reports

2020, Volume 20, Issue 5
May 23, 2020
Copyright © 2001-2020 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 1526

SINE2-1_CGi

SINE from the Pacific oyster genome: consensus.

Submitted:
05-Aug-2013
Accepted:
23-May-2020
Key Words:
SINE2/tRNA; SINE; Non-LTR Retrotransposon; Transposable Element; SINE2-1_CGi; CORE-SINE
Source:
Crassostrea gigas
Organism:
Crassostrea gigas
Taxonomy:
Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea
[] Authors:
Kojima,K.K. and Jurka,J.
Title:
SINEs from the Pacific oyster genome.
Journal:
Repbase Reports 20(5), 1526-1526 (2020)
Abstract:
~97% identical to consensus. It is similar to CALSINE3 and SINE2-6_SP.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Zhang,G., Fang,X., Guo,X., Li,L., Luo,R., Xu,F., Yang,P., Zhang,L., Wang,X., Qi,H., Xiong,Z., Que,H., Xie,Y. et al.
    The oyster genome reveals stress adaptation and complexity of shell formation.
    Nature 490(7418), 49-54 (2012)

© 2001-2020 - Genetic Information Research Institute