Repbase Reports

2019, Volume 19, Issue 5
May 26, 2019
Copyright © 2001-2019 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 755

DNA-18A_CCri

DNA transposon from the red seaweed: consensus.

Submitted:
15-May-2019
Accepted:
26-May-2019
Key Words:
DNA transposon; Transposable Element; Nonautonomous; DNA-18A_CCri
Source:
Chondrus crispus
Organism:
Chondrus crispus
Taxonomy:
Eukaryota; Rhodophyta; Florideophyceae; Gigartinales; Gigartinaceae; Chondrus
[] Authors:
Bao,W.
Title:
DNA transposons from the red seaweed.
Journal:
Repbase Reports 19(5), 755-755 (2019)
Abstract:
~94% identical to consensus. TSDs are 8-bp long. TIRs are 30-bp long. DNA-18A_CCri is assumed older than DNA-18_CCri, which is much longer due to captureing other fragment. There are at least two complete copies of DNA-18_CCri in the genome, one of which has anoter TE insertion, whereas at least 3 or 4 copies of DNA-18A_CCri in the genome.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Collén,J., Porcel,B., Carré,W., Ball,S.G., Chaparro,C., Tonon,T., Barbeyron,T., Michel,G., Noel,B. and Valentin,K.
    et al
    Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida.
    Proc Natl Acad Sci U S A 110(13), 5247-5252 (2013)

© 2001-2019 - Genetic Information Research Institute