Repbase Reports

2018, Volume 18, Issue 9
September 27, 2018
Copyright © 2001-2018 - Genetic Information Research Institute, Mountain View, California
ISSN# 1534-830X
Page 990

Gypsy-46_ALy-I

LTR retrotransposon from the Arabidopsis lyrata genome: internal portion.

Submitted:
28-Aug-2018
Accepted:
27-Sep-2018
Key Words:
Gypsy; LTR Retrotransposon; Transposable Element; Gypsy-46_; Gypsy-46_ALy-I; Gypsy-46_ALy-LTR; captured gene
Source:
Arabidopsis lyrata subsp. lyrata
Organism:
Arabidopsis lyrata subsp. lyrata
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata
[2] Authors:
Bao,W.
Title:
LTR retrotransposons from the Arabidopsis lyrata genome.
Journal:
Repbase Reports 18(9), 990-990 (2018)
Abstract:
Consensus. LTRs are 99% similar to each other. On the opposite strand there seems to be a captured host gene(?).
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Hu,T.T., Pattyn,P., Bakker,E.G., Cao,J., Cheng,J.F., Clark,R.M., Fahlgren,N., Fawcett,J.A. and Grimwood,J.
    et al
    The Arabidopsis lyrata genome sequence and the basis of rapid genome size change.
    Nat Genet 43(5), 476-481 (2011)

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