Repbase Reports |
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| 2018, Volume 18, Issue 12 |
| December 24, 2018 |
| Copyright © 2001-2018 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 1352 |
DNAV-1a_LVa |
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A integrated DNA virus sequences- consensus. |
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Submitted: 26-Jan-2017 |
Accepted: 24-Dec-2018 |
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Key Words: DNA Virus; Integrated Virus; DNAV-1_LVa; DNAV-1a_LVa; WSSV |
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Source: Litopenaeus vannamei |
Organism: Litopenaeus vannamei |
Taxonomy: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Dendrobranchiata; Penaeoidea; Penaeidae; Litopenaeus |
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Authors: Bao,W. |
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Title: DNA viruses from the shrimp genome. |
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Journal: Repbase Reports 18(12), 1352-1352 (2018) |
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Abstract: This preliminary consensus of DNAV-1_LVa is rebuilt from ~6 "raw" sequence derived from Pac-Bio and squence errors could be frequent in variable regions. It is distantly similar to other White spot syndrome virus (WSSV). Termini are not exactly certain. DNAV-1_LVa insertes preferentially or specifically into 5-bp TTAGG satellite, which is the putative telomere sequence in shrimp. The full length of DNAV-1_LVa is ~280-kb. DNAV-1a_LVa here represent the first segment, and the following respective segments are assigned with sequential names (DNAV-1b_LVa, DNAV-1c_LVa, DNAV-1d_LVa, DNAV-1d_LVa, DNAV-1f_LVa, and DNAV-1g_LVa), and are enlisted as seperate entries in Repbase.
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Derived: [2] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References:
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