Repbase Reports

2016, Volume 16, Issue 7
July 31, 2016
Copyright © 2001-2018 - Genetic Information Research Institute, Mountain View, California
ISSN# 1534-830X
Page 1458

Daphne-7_HRo

Daphne non-LTR retrotransposon: consensus sequence.

Submitted:
18-Nov-2011
Accepted:
31-Jul-2016
Key Words:
Daphne; Non-LTR Retrotransposon; Transposable Element; Daphne-7_HRo
Source:
Helobdella robusta
Organism:
Helobdella robusta
Taxonomy:
Eukaryota; Metazoa; Lophotrochozoa; Annelida; Clitellata; Hirudinida; Hirudinea; Rhynchobdellida; Glossiphoniidae; Helobdella
[2] Authors:
Kojima,K.K. and Jurka,J.
Title:
Non-LTR retrotransposons from the Californian leech genome.
Journal:
Repbase Reports 16(7), 1458-1458 (2016)
Abstract:
This consensus is generated from 24 sequences with >97% identity. Copies of this family are frequently flanked by (TA)n or (TACA)n microsatellite sequences at both sides. This sequence was derived from sequence data generated by DOE Joint Genome Institute.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Simakov,O., Marletaz,F., Cho,S.J., Edsinger-Gonzales,E., Havlak,P., Hellsten,U., Kuo,D.H., Larsson,T. et al.
    Insights into bilaterian evolution from three spiralian genomes.
    Nature 493(7433), 526-531 (2013)

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