Repbase Reports |
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| 2015, Volume 15, Issue 10 |
| October 31, 2015 |
| Copyright © 2001-2016 - Genetic Information Research Institute |
| ISSN# 1534-830X |
| Page 3447 |
hAT-N5_AFC |
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Non-autonomous hAT-type DNA transposon - consensus. |
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Submitted: 22-Mar-2011 |
Accepted: 31-Oct-2015 |
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Key Words: hAT; DNA transposon; Transposable Element; nonautonomous; hAT-N5_AFC |
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Source: Cichlidae |
Organism: Cichlidae |
Taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes |
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| [1] |
Authors: Kojima,K. and Jurka,J. |
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Title: Non-autonomous DNA transposons from Lake Malawi cichlids. |
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Journal: Repbase Reports 15(10), 3447-3447 (2015) |
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Abstract: >99% identical to consensus. TSDs are usually TA, unlike other hAT transposons. Perfect 14-bp TIRs.The 5' terminus is similar to those of hAT-N1_AFC, hAT-N58_DR, hAT-N58B_DR, hAT-N68_DR with 75-85% identity. The internal portion shows similarity with DNA-5_AFC and DNA-6_AFC with 85-90% identity.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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