Repbase Reports

2014, Volume 14, Issue 8
August 31, 2014
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 2088

Ambal-1_PMul

Non-LTR retrotransposon from the Ambal clade.

Submitted:
20-Mar-2013
Accepted:
31-Aug-2014
Key Words:
Ambal; Non-LTR Retrotransposon; Transposable Element; Ambal-1_PMul
Source:
Pseudo-nitzschia multiseries
Organism:
Pseudo-nitzschia multiseries
Taxonomy:
Eukaryota; stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Bacillariales; Bacillariaceae; Pseudo-nitzschia
[1] Authors:
Kapitonov,V.V. and Jurka,J.
Title:
Ambal retrotransposons in the pennate diatom genome.
Journal:
Repbase Reports 14(8), 2088-2088 (2014)
Abstract:
The genome contains many families of Ambal non-LTR retrotransposons. Similar to Ambal retrotransposons in diatoms, Ambal-1_PMul is acompanied by its non-autonomous derivates (with conserved ~100-bp 5' and 3' termini). Ambal-1_PMul elements are flanked by 18-20 bp TSDs. The ~3-kb region between the end of ORF1 and beginning of ORF2 is composed of a minisatellite array.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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