Repbase Reports

2014, Volume 14, Issue 10
October 31, 2014
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 2699

Mariner-1_GA

A family of Mariner/Tc1-type DNA transposons - consensus.

Submitted:
22-Mar-2011
Accepted:
31-Oct-2014
Key Words:
Mariner/Tc1; DNA transposon; Transposable Element; Mariner-1_GA
Source:
Gasterosteus aculeatus
Organism:
Gasterosteus aculeatus
Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Gasterosteales; Gasterosteidae; Gasterosteus
[1] Authors:
Kojima,K.K. and Jurka,J.
Title:
DNA transposons from the three-spined stickleback genome.
Journal:
Repbase Reports 14(10), 2699-2699 (2014)
Abstract:
~97% identical to consensus. 73-bp perfect TIRs. This is specifically inserted into TTAA and appears to generate no TSDs. However the similarity to Mariner/Tc1-type transposase indicates that it makes TA TSDs and ends with CAG..CTG. This sequence was derived from sequence data generated by the Broad Institute Stickleback Genome Project.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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