Repbase Reports

2013, Volume 13, Issue 4
April 30, 2013
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 1612

Non-LTR-1_ACar

Putative non-autonomous non-LTR retrotransposons - a consensus sequence.

Submitted:
27-Dec-2012
Accepted:
27-DEC-2012
Key Words:
Non-LTR Retrotransposon; Transposable Element; Nonautonomous; Non-LTR-1_ACar
Source:
Anolis carolinensis
Organism:
Anolis carolinensis
Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Iguania; Iguanidae; Polychrotinae; Anolis
[2] Authors:
Kojima,K.K. and Jurka,J.
Title:
Non-LTR retrotransposons from green anole.
Journal:
Repbase Reports 13(4), 1612-1612 (2013)
Abstract:
~97% identical to consensus. It includes sequences derived from L1 and RTEX1. Its 3' end is ~93% identical to that of RTEX-1_ACar; thus it is likely mobilized by RTEX-1_ACar. Encoded protein has no known domain.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Alf??ldi,J., Di Palma,F., Grabherr,M., Williams,C., Kong,L., Mauceli,E., Russell,P., Lowe,C.B., Glor,R.E. et al.
    The genome of the green anole lizard and a comparative analysis with birds and mammals.
    Nature 477(7366), 587-591 (2011)

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