Repbase Reports

2013, Volume 13, Issue 2
February 28, 2013
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 1134

Mariner-N1_ALy

Mariner/Tc1-type DNA transposon from Arabidopsis lyrata - a consensus.

Submitted:
22-Mar-2011
Accepted:
28-Feb-2013
Key Words:
Mariner/Tc1; DNA transposon; Transposable Element; nonautonomous; Mariner-N1_ALy
Source:
Arabidopsis lyrata
Organism:
Arabidopsis lyrata
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
[2] Authors:
Kojima,K.K. and Jurka,J.
Title:
Mariner/Tc1 DNA transposons from Arabidopsis lyrata.
Journal:
Repbase Reports 13(2), 1134-1134 (2013)
Abstract:
This consensus is generated from 10 sequences with >93% identity. 54-bp TIRs. TA TSDs. This family is ~85% identical to ATHPOGON1 in Arabidopsis thaliana.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Hu,T.T., Pattyn,P., Bakker,E.G., Cao,J., Cheng,J.F., Clark,R.M., Fahlgren,N., Fawcett,J.A., Grimwood,J. et al.
    The Arabidopsis lyrata genome sequence and the basis of rapid genome size change.
    Nat Genet 43(5), 476-481 (2011)

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