Repbase Reports

2012, Volume 12, Issue 8
August 31, 2012
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 1727

SINE-1_EPa

SINE non-LTR retrotransposon from the Eutrema parvulum genome: consensus.

Submitted:
02-Sep-2011
Accepted:
20-AUG-2012
Key Words:
SINE2/tRNA; SINE; Non-LTR Retrotransposon; Transposable Element; SINE-1_EPa
Source:
Eutrema parvulum
Organism:
Eutrema parvulum
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
[2] Authors:
Jurka,J.
Title:
Non-LTR retrotransposons from the Eutrema parvulum genome.
Journal:
Repbase Reports 12(8), 1727-1727 (2012)
Abstract:
~76% identical to consensus. The consensus is ~78% identical to AtSB3.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Dassanayake,M., Oh,D.H., Haas,J.S., Hernandez,A., Hong,H., Ali,S., Yun,D.J., Bressan,R.A., Zhu,J.K., Bohnert,H.J. et al.
    The genome of the extremophile crucifer Thellungiella parvula.
    Nat Genet 43(9), 913-918 (2011)

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