Repbase Reports

2012, Volume 12, Issue 7
July 31, 2012
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 1326

LOA-1_DGri

LOA non-LTR retrotransposon from Drosophila grimshawi.

Submitted:
10-Jun-2011
Accepted:
31-Jul-2012
Key Words:
Loa; Non-LTR Retrotransposon; Transposable Element; LOA-1_DGri
Source:
Drosophila grimshawi
Organism:
Drosophila grimshawi
Taxonomy:
Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Hawaiian Drosophila; grimshawi group; grimshawi subgroup
[2] Authors:
Kojima,K.K. and Jurka,J.
Title:
Non-LTR retrotransposons from the Drosophila grimshawi genome.
Journal:
Repbase Reports 12(7), 1326-1326 (2012)
Abstract:
>99% identical to consensus. It is ~88% identical to LOA from Drosophila silvestris, but is not fused with Gypsy. Instead, some copies are inserted into a tandem array of Gypsy-5_DGri-LTR with 12-bp TSDs (ATCTTCGCCAAT).
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Drosophila 12 Genomes Consortium
    Evolution of genes and genomes on the Drosophila phylogeny.
    Nature 450(7167), 203-218 (2007)

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