Repbase Reports

2012, Volume 12, Issue 4
April 30, 2012
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 431

Helitron-N1_DEl

DNA transposon from the Drosophila elegans genome: consensus.

Submitted:
18-Oct-2011
Accepted:
30-Apr-2012
Key Words:
Helitron; DNA transposon; Transposable Element; Nonautonomous; Helitron-N1_DEl
Source:
Drosophila elegans
Organism:
Drosophila elegans
Taxonomy:
Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora; melanogaster group; elegans subgroup
[1] Authors:
Kojima,K.K. and Jurka,J.
Title:
Helitrons from Drosophila elegans.
Journal:
Repbase Reports 12(4), 431-431 (2012)
Abstract:
~98% identical to consensus. It shows similarity to Helitron-2N1_DVir in sequence and terminal structure (It is inserted between TTT and TTT and ended with TTATA...CTTG). It is a basic non-autonomous Helitron family and it has many derivatives with duplications of internal sequences. One major derivative family has a duplication of the sequence 1-328 of Helitron-N1_DEl, and another family has a duplication of the sequence 335-482. This consensus sequence was derived from the data released in Genbank by the Baylor College of Medicine Human Genome Sequencing Center, prior to publication.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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