Repbase Reports

2012, Volume 12, Issue 12
December 31, 2012
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 2702

TRIM-V31-I

LTR retrotransposon from the common grape vine: internal portion.

Submitted:
02-Nov-2012
Accepted:
31-Dec-2012
Key Words:
LTR Retrotransposon; Transposable Element; TRIM-V31; TRIM-V31-LTR; TRIM-V31-I
Source:
Malus x domestica
Organism:
Malus x domestica
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Malus
[2] Authors:
Kalendar,R.
Title:
Non-autonomous LTR retrotransposon from Vitis vinifera.
Journal:
Repbase Reports 12(12), 2702-2702 (2012)
Abstract:
~97% identical to consensus. 5bp TSDs. Some elements show LTR-I-LTR-I-LTR structure.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Jaillon,O., Aury,J.M., Noel,B., Policriti,A., Clepet,C., Casagrande,A., Choisne,N., Aubourg,S., Vitulo,N. et al.
    The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla.
    Nature 449(7161), 463-467 (2007)

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