Repbase Reports

2012, Volume 12, Issue 10
October 31, 2012
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 2188

Tx1-Sat-1_SK

A Tx1 non-LTR retrotransposon family from Saccoglossus kowalevskii - consensus.

Submitted:
22-Mar-2011
Accepted:
31-Oct-2012
Key Words:
Tx1; Non-LTR Retrotransposon; Transposable Element; Tx1-Sat-1_SK
Source:
Saccoglossus kowalevskii
Organism:
Saccoglossus kowalevskii
Taxonomy:
Eukaryota; Metazoa; Hemichordata; Enteropneusta; Harrimaniidae; Saccoglossus
[1] Authors:
Kojima,K.K. and Jurka,J.
Title:
Minisatellite-specific Tx1 non-LTR retrotransposons from the acorn worm.
Journal:
Repbase Reports 12(10), 2188-2188 (2012)
Abstract:
This consensus is generated from 30 sequences with >95% identity. This family is sandwiched by two arrays composed by the same units "TGACGAGAAATGTACTAATTACATGCATCCCAGGGC". Thus it is a minisatellite-specific non-LTR retrotransposon family. This sequence was derived from sequence data generated by Human Genome Sequencing Center at Baylor College of Medicine: the acorn worm genome.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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