Repbase Reports
2011, Volume 11, Issue 9
September 30, 2011
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 2569

Sagan-1_RO

DNA transposon from Rhizopus oryzae - a consensus.

Submitted:
26-Apr-2011 		Accepted:
30-Sep-2011
Key Words:
Mariner/Tc1; DNA transposon; Transposable Element; Sagan-1_RO
Source:
Rhizopus oryzae 		Organism:
Rhizopus oryzae 		Taxonomy:
Eukaryota; Fungi; Fungi incertae sedis; Basal fungal lineages; Mucoromycotina; Mucorales; Mucoraceae; Rhizopus
[2] Authors:
Kojima,K.K. and Jurka,J.
Title:
Sagan, a new group of DNA transposons belonging to the Mariner/Tc1/IS630 superfamily.
Journal:
Repbase Reports 11(9), 2569-2569 (2011)
Abstract:
Sagan is a new group of DNA transposons belonging to the Mariner/Tc1/IS630 superfamily. But there is an insertion between D and E in the encoded DDE-transposase. The conserved DDE residues are D366, D462, and E617. Sagan-1_RO shares several features with other Mariner/Tc1/IS630, such as TA TSDs and short (32-bp) TIRs.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Ma,L.J., Ibrahim,A.S., Skory,C., Grabherr,M.G., Burger,G., Butler,M., Elias,M., Idnurm,A., Lang,B.F., Sone,T. et al.
    Genomic analysis of the basal lineage fungus Rhizopus oryzae reveals a whole-genome duplication.
    PLoS Genet 5(7), e1000549-e1000549 (2009)

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