Repbase Reports

2011, Volume 11, Issue 5
May 31, 2011
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 1733

Mariner-1_NGr

Mariner/Tc1-like DNA transposon - consensus.

Submitted:
04-Apr-2011
Accepted:
31-May-2011
Key Words:
Mariner/Tc1; DNA transposon; Transposable Element; Mariner-1_NGr
Source:
Naegleria gruberi
Organism:
Naegleria gruberi
Taxonomy:
Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria
[2] Authors:
Jurka,J. and Kojima,K.K.
Title:
Mariner/Tc1-like DNA transposons from Naegleria gruberi.
Journal:
Repbase Reports 11(5), 1733-1733 (2011)
Abstract:
This family encodes a DD34D-type transposase, which shows a low similarity to transposases of Mariner, Pogo, and IS630 DNA transposons. Since it is closer to Mariner/Tc1/Pogo than Zator, it is classified into Mariner/Tc1/Pogo superfamily, but it could be derived from bacterial transposons independently. 68-bp TIRs. TA TSDs.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Fritz-Laylin,L.K., Prochnik,S.E., Ginger,M.L., Dacks,J.B., Carpenter,M.L., Field,M.C., Kuo,A., Paredez,A. et al.
    The genome of Naegleria gruberi illuminates early eukaryotic versatility.
    Cell 140(5), 631-642 (2010)

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