Repbase Reports

2011, Volume 11, Issue 1
January 31, 2011
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 590

Jockey-N6C_CQ

A non-autonomous Jockey-like non-LTR retrotransposon family from Culex quinquefasciatus - consensus.

Submitted:
23-Dec-2010
Accepted:
31-Jan-2011
Key Words:
Jockey; Non-LTR Retrotransposon; Transposable Element; nonautonomous; Jockey-N6_CQ; Jockey-N6B_CQ; Jockey-N6C_CQ
Source:
Culex quinquefasciatus
Organism:
Culex quinquefasciatus
Taxonomy:
Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Culicini; Culex; Culex
[2] Authors:
Kojima,K.K. and Jurka,J.
Title:
Non-autonomous Jockey non-LTR retrotransposons from the southern house mosquito.
Journal:
Repbase Reports 11(1), 590-590 (2011)
Abstract:
This consensus is generated from 30 sequences with >89% identity. This family encodes a protein similar to Jockey ORF1p but does not encode ORF2p. Thus it is a non-autonomous non-LTR retrotransposon derived from Jockey, like HeT-A. The consensus is ~82% identical to that of Jockey-N6B_CQ.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Arensburger,P., Megy,K., Waterhouse,R.M. and Abrudan,J. et al.
    Sequencing of Culex quinquefasciatus establishes a platform for mosquito comparative genomics.
    Science 330(6000), 86-88 (2010)

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