Repbase Reports

2010, Volume 10, Issue 9
September 30, 2010
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 1456

Copia-6_AG-I

Copia-6_AG internal region.

Submitted:
01-Sep-2010
Accepted:
30-Sep-2010
Key Words:
Copia; LTR Retrotransposon; Transposable Element; Copia-6_AG-I
Source:
Anopheles gambiae
Organism:
Anopheles gambiae
Taxonomy:
Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
[1] Authors:
Fernandez Medina,R.D., Struchiner,C.J. and Ribeiro,J.M.C.
Title:
Transposable elements from Anopheles gambiae.
Journal:
Repbase Reports 10(9), 1456-1456 (2010)
Abstract:
Consensus sequence out of four sequences of internal region of Copia-6_AG. The four sequences within this family have a p-distance at the nucleotide level considering the full-length alignment of 0,0009 (sd=0,0003). The LTRs are 149 nucleotides long and present a very high degree of identity (p-dist=0,0033, ds=0,0038). In two of these sequences the 3? and 5? LTRs are identical indicating that they have inserted recently and have not had time to accumulate mutations between the LTRs.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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