Repbase Reports

2010, Volume 10, Issue 4
April 30, 2010
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 551

Copia-1-I_FCy

Internal portion of a Copia-1_FCy LTR retrotransposon - consensus.

Submitted:
21-Jan-2010
Accepted:
21-JAN-2010
Key Words:
Copia; LTR Retrotransposon; Transposable Element; Copia-1_FCy; Copia-1-LTR_FCy; Copia-1-I_FCy
Source:
Fragilariopsis cylindrus
Organism:
Fragilariopsis cylindrus
Taxonomy:
Eukaryota; stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Bacillariales; Bacillariaceae; Fragilariopsis
[1] Authors:
Kapitonov,V.V. and Jurka,J.
Title:
Families of self-primed copia LTR retrotransposons from diatom and fungus.
Journal:
Repbase Reports 10(4), 551-551 (2010)
Abstract:
This family is characterized by 5-bp TSDs and a short palindrome at the 5' terminus of the internal portion that serves likely as the RT primer. This family belongs to an ancient group of self-primed copia LTR retrotransposons. This sequence was derived from sequence data produced by the US Department of Energy Joint Genome Institute http://www.jgi.doe.gov/ in collaboration with the user community.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

© 2001-2019 - Genetic Information Research Institute