Repbase Reports

2010, Volume 10, Issue 4
April 30, 2010
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 555

CAULIV-1B_SBi

Caulimovirus-like sequence.

Submitted:
08-Feb-2010
Accepted:
08-FEB-2010
Key Words:
Caulimoviridae; Integrated Virus; CAULIV-1A_SBi; CAULIV-1B_SBi
Source:
Sorghum bicolor
Organism:
Sorghum bicolor
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACCAD clade; Panicoideae; Andropogoneae; Sorghum
[1] Authors:
Kojima,K. and Jurka,J.
Title:
Integrated Caulimovirus-like sequence from Sorghum bicolor.
Journal:
Repbase Reports 10(4), 555-555 (2010)
Abstract:
This is similar to a partial sequence of Caulimovirus. This sequence is sometimes tandemly inserted, but the coding regions of reverse transcriptase and RNase H are lost. Probably circular (sub)genomic DNA of Caulimovirus is integrated into the genome. Several copies show >98% sequence identity. The 5' 540-bp and 3' 991-bp are >97% identical to those of CAULIV-1B_SBi.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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