Repbase Reports

2010, Volume 10, Issue 3
March 31, 2010
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 511

SINE2-1_AFC

SINE element - consensus.

Submitted:
27-Jan-2010
Accepted:
31-Mar-2010
Key Words:
SINE2/tRNA; SINE; Non-LTR Retrotransposon; Transposable Element; SINE_AFC; SINE2-1_AFC
Source:
Cichlidae
Organism:
Cichlidae
Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Euteleostei; Neoteleostei; Acanthomorpha; Acanthopterygii; Percomorpha; Perciformes; Labroidei
[1] Authors:
Kojima,K. and Jurka,J.
Title:
SINE elements from Lake Malawi cichlids.
Journal:
Repbase Reports 10(3), 511-511 (2010)
Abstract:
>82% identical to consensus. Its 5' sequence is similar to SINE_AFC and SINE3_AFC, and its 3' sequence is similar to SINE_AFC and SINE3-1a. Therefore, this SINE is likely transposed by an CR1/L2 clade non-LTR retrotransposon.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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