Repbase Reports

2010, Volume 10, Issue 3
March 31, 2010
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 509

PSINE1

SINE element - consensus.

Submitted:
07-Nov-2009
Accepted:
31-Mar-2010
Key Words:
SINE; Non-LTR Retrotransposon; Transposable Element; PSINE1
Source:
Procavia capensis
Organism:
Procavia capensis
Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Hyracoidea; Procaviidae; Procavia
[1] Authors:
Jurka,J.
Title:
SINE elements from hyrax.
Journal:
Repbase Reports 10(3), 509-509 (2010)
Abstract:
>96% identical to consensus. They may still be actively retroposed (some copies are 100% identical to consensus). There is a limited sequence homology between PSINE1 and 5' ends of AFRO_LA and RTE1_LA suggesting that PSINE1 are RTE-dependent SINEs. They are present in a large copy number in the hyrax genome (>600,000). This sequence was derived from sequence data generated by Genome Sequencing Center at Baylor College of Medicine: hyrax.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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