Repbase Reports

2010, Volume 10, Issue 12
December 31, 2010
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 2173

TUBE4

SINE element (consensus).

Submitted:
08-Sep-2010
Accepted:
31-Dec-2010
Key Words:
SINE; Non-LTR Retrotransposon; Transposable Element; TUBE4
Source:
Tupaia belangeri
Organism:
Tupaia belangeri
Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia
[1] Authors:
Bao,W. and Jurka,J.
Title:
SINE elements from tree shrew.
Journal:
Repbase Reports 10(12), 2173-2173 (2010)
Abstract:
This is a composite SINE element: 1-94 nt is derived from 1-92 nt of TUBE3 element, 95-264 nt is derived from 1-197 of ALU-like element, the origin of position 266-301 is uncertain. Elements are ~78% identical to the consensus. We thank the Broad Institute Genome Sequencing Platform and Genome Sequencing and Analysis Program, Federica Di Palma, and Kerstin Lindblad-Toh for making the data for Tupaia belangeri available.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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