Repbase Reports

2010, Volume 10, Issue 12
December 31, 2010
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 2178

MSAT-105_GM

105-bp minisatellite in Glycine max.

Submitted:
07-Dec-2010
Accepted:
31-Dec-2010
Key Words:
MSAT; Satellite; Simple Repeat; minisatellite; retrotransposon; soybean; MSAT-105_GM
Source:
Glycine max
Organism:
Glycine max
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine
[2] Authors:
Mogil,L.S. and Laten,H.M.
Title:
Retrotransposon-associated minisatellites in Glycine max.
Journal:
Repbase Reports 10(12), 2178-2178 (2010)
Abstract:
Consensus sequence (average identity 96%) from 100 copies of a 105-bp minisatellite sequence found in tandem arrays on all soybean chromosomes. Over 10,000 monomers in the genome. Many arrays located in noncoding regions of several different families of LTR retrotransposons.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Laten,H.M., Mogil,L.S. and Wright,L.N.
    A shotgun approach to discovering and reconstructing consensus retrotransposons ex novo from dense contigs of short sequences derived from Genbank Genome Survey Sequence database records.
    Gene 448, 168-173 (2009)

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