Repbase Reports

2010, Volume 10, Issue 12
December 31, 2010
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 2166

Copia-1_TRe-I

Internal region of an LTR retrotransposon.

Submitted:
20-Nov-2010
Accepted:
31-Dec-2010
Key Words:
Copia; LTR Retrotransposon; Transposable Element; LTR; reverse transcriptase; integrase; Ribonuclease H; retrotranspon; white clover; Copia-1_TRe-I
Source:
Trifolium repens
Organism:
Trifolium repens
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
[2] Authors:
Laten,H.M., Hand,M.L., Cogan,N.O.I. and Forster,J.W.
Title:
LTR retrotransposons in white clover, Trifolium repens L.
Journal:
Repbase Reports 10(12), 2166-2166 (2010)
Abstract:
Internal region of a Copia-like retrotransposon possessing a single, intact gag-pol ORF encoding conserved domains for gag, prot, int, rt and int. Flanked by identical LTRs. Genbank Accession GU443966 position 22070 to 26646.
Derived:
Positions 22070 26646 Accession No GU443966 EMBL/GenBank/DDBJ
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Hand,M.L., Cogan,N.O.I., Sawbridge,T.I., Spangenberg,G.C. and Forster,J.W.
    Comparision of homoeolocus organisation in paired BAC clones from white clover (Trifolium repens L.) and microcolinearity with model legume species.
    BMC Plant Biology 10, 94-94 (2010)

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