Repbase Reports

2010, Volume 10, Issue 11
November 30, 2010
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 1903

hAT5-N1_DR

hAT5-type DNA transposon - consensus.

Submitted:
05-Mar-2010
Accepted:
30-Nov-2010
Key Words:
hAT; DNA transposon; Transposable Element; Nonautonomous; hAT5-N1_DR
Source:
Danio rerio
Organism:
Danio rerio
Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
[2] Authors:
Kojima,K.K. and Jurka,J.
Title:
hAT5-type DNA transposons from teleost fish.
Journal:
Repbase Reports 10(11), 1903-1903 (2010)
Abstract:
>96% identical to consensus. 5-bp TSDs. Both termini are similar to DNA-5-3_DR, DNA-5-7_DR, and DNA-5-8_DR with >70% identity. This transposon encodes a CCHH zinc-finger protein similar to the N-terminal portion of hAT transposase. These characteristics show that this is a nonautonomous member of hAT5 group of hAT-type DNA transposon, represented by hAT5-1_NV from Nematostella vectensis [1]. This sequence was derived from sequence data generated by the Danio rerio Sequencing Group at the Sanger Institute.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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