Repbase Reports

2010, Volume 10, Issue 11
November 30, 2010
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 1845

Mariner-3_DR

A family of Mariner/Tc1-type DNA transposons - consensus.

Submitted:
23-Jun-2010
Accepted:
30-Nov-2010
Key Words:
Mariner/Tc1; DNA transposon; Transposable Element; DNA-2-3_DR; Mariner-3_DR
Source:
Danio rerio
Organism:
Danio rerio
Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
[1] Authors:
Kojima,K.K. and Jurka,J.
Title:
Distant groups of Mariner/Tc1-type DNA transposons from vertebrates.
Journal:
Repbase Reports 10(11), 1845-1845 (2010)
Abstract:
>93% identical to consensus. 68-bp TIRs with one mismatch. This is specifically inserted into TTAA and appears to generate no TSDs. However the similarity to Mariner/Tc1-type transposase indicates that it makes TA TSDs and ends with CAG..CTG. This is highly similar to DNA-2-3_DR, and probably DNA-2-3_DR is a nonautonomous derivative of this transposon. This sequence was derived from sequence data generated by the Danio rerio Sequencing Group at the Sanger Institute.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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