Repbase Reports |
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| 2009, Volume 9, Issue 7 |
| July 31, 2009 |
| Copyright © 2001-2016 - Genetic Information Research Institute |
| ISSN# 1534-830X |
| Page 1344 |
Crack-1_IS |
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Crack-1_IS is a non-LTR retrotransposon - a consensus sequence. |
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Submitted: 22-Jul-2009 |
Accepted: 31-Jul-2009 |
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Key Words: Crack; Non-LTR Retrotransposon; Transposable Element; Interspersed repeat; L1 ORF1; endonuclease; reverse transcriptase; Crack-1_IS |
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Source: Ixodes scapularis |
Organism: Ixodes scapularis |
Taxonomy: Eukaryota; Metazoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes |
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| [1] |
Authors: Kapitonov,V.V. and Jurka,J. |
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Title: Crack-1_IS, a family of Crack non-LTR retrotransposons from the deer tick genome. |
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Journal: Repbase Reports 9(7), 1344-1344 (2009) |
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Abstract: Crack-1_IS is a non-LTR retrotransposon that belongs to the Crack clade, a sister clade of L2 and Daphne. Like in other Crack retrotransposons, the ORF1 protein in Crack-1_IS contains a domain similar to the central domain conserved in vertebrate L1 ORF1 protein The ORF1 protein contains also in its N-terminal part the PHD finger (C4HC3), which is probably typical to Cracks in arthropoda.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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