Repbase Reports

2009, Volume 9, Issue 3
March 31, 2009
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 722

RTEX-1_NV

Starlet sea anemone RTEX-1_NV autonomous Non-LTR Retrotransposon - consensus.

Submitted:
31-Mar-2009
Accepted:
31-Mar-2009
Key Words:
RTEX; Non-LTR Retrotransposon; Transposable Element; CR1e-1_NV; RTEX-1_NV
Source:
Nematostella vectensis
Organism:
Nematostella vectensis
Taxonomy:
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
[2] Authors:
Kapitonov,V.V. and Jurka,J.
Title:
RTEX non-LTR Retrotransposons from the starlet sea anemone genome.
Journal:
Repbase Reports 9(3), 722-722 (2009)
Abstract:
This non-LTR retrotransposon belongs to the RTEX clade, a sister clade of RTEs. Contrary to RTEs, RTEX elements code for the ORF1 protein that contains the esterase domain, similar to ORF1 in some families of CR1 and L2.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Putnam,N.H., Srivastava,M., Hellsten,U., Dirks,B., Chapman,J., Salamov,A., Terry,A., Shapiro,H., Lindquist,E., Kapitonov,V.V., Jurka,J., Genikhovich,G., Grigoriev,I.V., Lucas,S.M., Steele,R.E., Finnerty,J.R., Technau,U., Martindale,M.Q. and Rokhsar,D.S.
    Sea anemone genome reveals ancestral eumetazoan gene repertoire and genomic organization.
    Science 317(5834), 86-94 (2007)

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