Repbase Reports

2008, Volume 8, Issue 7
July 31, 2008
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 772

MuDR-13_VV

MuDR-13_VV, an autonomous DNA transposon - a consensus sequence. Partial sequence.

Submitted:
11-Jul-2008
Accepted:
31-Jul-2008
Key Words:
MuDR; DNA transposon; Transposable Element; mutator; Mutavine-13; MuDR-13_VV
Source:
Vitis vinifera
Organism:
Vitis vinifera
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; Vitales; Vitaceae; Vitis
[1] Authors:
Benjak,A., Forneck,A. and Casacuberta,J.M.
Title:
Genome-wide analysis of the cut-and-paste transposons of grapevine. PlosONE: submitted.
Journal:
Repbase Reports 8(7), 772-772 (2008)
Abstract:
MuDR-13_VV (Mutavine-13 in [1]) consensus is an autonomous element. Its individual copies are >90% identical to the consensus sequence. Elements from this family have an unusual 3' ending, consisting of tandem repeated blocks of sequences (>3kb in total). Although several copies seem to be present in the genome, all shotgun sequences available so far physically stop in this region, possibly due to assembly limitations of such repeated regions. Therefore the true 3' border of the element is not known.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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