Repbase Reports

2008, Volume 8, Issue 7
July 31, 2008
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 761

Harbinger-1_VV

Harbinger-1_VV - DNA transposon from grapevine.

Submitted:
11-Jul-2008
Accepted:
31-Jul-2008
Key Words:
Harbinger; DNA transposon; Transposable Element; TIR; PIF; Pifvine-1; Harbinger-1_VV
Source:
Vitis vinifera
Organism:
Vitis vinifera
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; Vitales; Vitaceae; Vitis
[1] Authors:
Benjak,A., Forneck,A. and Casacuberta,J.M.
Title:
Genome-wide analysis of the cut-and-paste transposons of grapevine. PlosONE: submitted.
Journal:
Repbase Reports 8(7), 761-761 (2008)
Abstract:
Harbinger-1_VV (Pifvine-1 in [1]) is an autonomous DNA transposon from Vitis vinifera. Individual copies are 95% similar to their consensus. Elements are flanked by 3 bp-long target site duplications. Harbinger-1_VV has 20 bp-long terminal inverted repeat.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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