Repbase Reports

2008, Volume 8, Issue 7
July 31, 2008
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 758

EnSpm-6_VV

EnSpm-6_VV, an autonomous DNA transposon - a consensus sequence.

Submitted:
11-Jul-2008
Accepted:
31-Jul-2008
Key Words:
EnSpm; DNA transposon; Transposable Element; CACTA; TIR; Cactavine-6; EnSpm-6_VV
Source:
Vitis vinifera
Organism:
Vitis vinifera
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; Vitales; Vitaceae; Vitis
[1] Authors:
Benjak,A., Forneck,A. and Casacuberta,J.M.
Title:
Genome-wide analysis of the cut-and-paste transposons of grapevine. PlosONE: submitted.
Journal:
Repbase Reports 8(7), 758-758 (2008)
Abstract:
EnSpm-6_VV (Cactavine-6 in [1]) is virtually an autonomous element because its individual copies do not have an intact ORF due to premature stop codons and/or frameshifts. Individual copies are >95% identical to the consensus sequence. EnSpm-6_VV contains 13 bp-long TIRs which are flanked by 3 bp-long TSDs.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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